chr5:112151204:C>T Detail (hg19) (APC)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr5:112,151,204-112,151,204
hg38	chr5:112,815,507-112,815,507 View the variant detail on this assembly version.

HGVS

APC

Type	Transcript	Protein
RefSeq	NM_000038.5:c.847C>T	NP_000029.2:p.Arg283Ter
	NM_001127511.2:c.793C>T	NP_001120983.2:p.Arg265Ter
	NM_001127510.2:c.847C>T	NP_001120982.1:p.Arg283Ter
Ensemble	ENST00000257430.9:c.847C>T	ENST00000257430.9:p.Arg283Ter
	ENST00000504915.3:c.847C>T	ENST00000504915.3:p.Arg283Ter
	ENST00000507379.6:c.793C>T	ENST00000507379.6:p.Arg265Ter
	ENST00000508376.6:c.847C>T	ENST00000508376.6:p.Arg283Ter
	ENST00000509732.6:c.847C>T	ENST00000509732.6:p.Arg283Ter
	ENST00000512211.7:c.847C>T	ENST00000512211.7:p.Arg283Ter
	ENST00000713638.1:c.847C>T	ENST00000713638.1:p.Arg283Ter
	ENST00000713639.1:c.670C>T	ENST00000713639.1:p.Arg224Ter

Summary

MGeND

Clinical significance	Pathogenic not provided
Variant entry	19
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
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Links

APC

Type	Database	ID	Link
Gene	MIM	611731	OMIM
	HGNC	583	HGNC
	Ensembl	ENSG00000134982	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM19679	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
not provided		fundus of stomach	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		caecum	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		descending colon	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		colon, unspecified	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		malignant neoplasm of rectosigmoid junction	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		malignant neoplasm of rectum	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
Pathogenic	2019/09/18	other	germline	MGS000029 (TMGS000133)	Hitoshi Nakagama	National Cancer Center Japan
Pathogenic		Primary adenocarcinoma of colon (disorder)	unknown	MGS000023 (TMGS000082)	Manabu Muto	Kyoto University
Pathogenic		Carcinoma of cecum (disorder)	unknown	MGS000023 (TMGS000082)	Manabu Muto	Kyoto University
Pathogenic	2021/03/19	Colorectal	germline	MGS000050 (TMGS000114)	Yukihide Momozawa Koichi Matsuda	RIKEN The University of Tokyo

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2023-11-14	criteria provided, single submitter	Hereditary cancer-predisposing syndrome	germline	Detail
Pathogenic	2021-05-06	criteria provided, multiple submitters, no conflicts	not provided	germline unknown	Detail
Pathogenic	2019-04-22	criteria provided, single submitter	Familial multiple polyposis syndrome	germline	Detail
Pathogenic	2018-10-31	criteria provided, single submitter	Desmoid disease, hereditary,Neoplasm of stomach,hepatocellular carcinoma,familial adenomatous polyposis 1,Carcinoma of colon	unknown	Detail
Pathogenic	2018-10-31	criteria provided, single submitter	Desmoid disease, hereditary,Neoplasm of stomach,hepatocellular carcinoma,familial adenomatous polyposis 1,Carcinoma of colon	unknown	Detail
Pathogenic	2018-10-31	criteria provided, single submitter	Desmoid disease, hereditary,Neoplasm of stomach,hepatocellular carcinoma,familial adenomatous polyposis 1,Carcinoma of colon	unknown	Detail
Pathogenic	2018-10-31	criteria provided, single submitter	Desmoid disease, hereditary,Neoplasm of stomach,hepatocellular carcinoma,familial adenomatous polyposis 1,Carcinoma of colon	unknown	Detail
Pathogenic	2018-10-31	criteria provided, single submitter	Desmoid disease, hereditary,Neoplasm of stomach,hepatocellular carcinoma,familial adenomatous polyposis 1,Carcinoma of colon	unknown	Detail
Pathogenic		no assertion criteria provided	Carcinoma of colon	unknown	Detail
Pathogenic	2016-07-11	no assertion criteria provided	colorectal cancer	somatic	Detail
Pathogenic	2023-02-18	reviewed by expert panel	familial adenomatous polyposis 1	germline unknown	Detail
Pathogenic	2024-01-30	criteria provided, multiple submitters, no conflicts	familial adenomatous polyposis 1	germline unknown	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.121	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND not provided	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Familial multiple polyposis syndrome	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND multiple conditions	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND multiple conditions	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND multiple conditions	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND multiple conditions	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND multiple conditions	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Carcinoma of colon	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Colorectal cancer	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Familial adenomatous polyposis 1	ClinVar	Detail
NM_000038.6(APC):c.847C>T (p.Arg283Ter) AND Familial adenomatous polyposis 1	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs786201856 dbSNP
Genome: hg19
Position: chr5:112,151,204-112,151,204
Variant Type: snv
Reference Allele: C
Alternative Allele: T

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